Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015806572.1_cds_XP_016494401.1_8813
CDS Infomation

[gene=LOC107813635] [db_xref=GeneID:107813635] [protein=protein WVD2-like 5 isoform X2] [protein_id=XP_016494401.1] [location=join(78073..78327,78409..78681,78826..78887,79035..79106,79223..79325,79426..79497,79603..79713,81886..82365)] [gbkey=CDS]
Sequence

ATGATGGATGTTGTCAATAACATAGCTGTTTCTGGAAACGGGTTGGGCTTTGGAAATGGA
GTTCACCAACTTCCTGAAGTTGTTGCTGGCATCCCAAACGGGATGCCTCATGCAAGTTCC
AGTACTGAAGAACTAGAGAGGAGTTTCCAGAGTACAGCGGTATTGAATGATAGTGAAACA
GTTGACTCTTCTGTCCAAGAGGTCAGTCGTGAAGCTATGACAACTGCAGAAAGCAATGCT
GGTGTCAGTTCCGAGGAACATGAAGCAAAAGAATCTGATGAGGCGAAGAACAGTAAAGAG
CGAAAGGCTCCAGGAAGGGCAAGGAACACTAAGAATTCAAGCCCTAAAAATGGCGCAGCC
AAGAAAAGTAAAGATGGAAAAGATGCATCAAATGGTACCCTTGCTTCCAAATCGCGTCCG
AAACAGCCATCTTCCACTGATGCAAAGAGTAAATCATTCAGTGACAAGAAAACTACTGAG
TACTATTCAAAACCTACATTGGCTCATCTAAATGTTAATCGTGCTAAGCAACCAGGCCAT
GCTGAAGTAGCATCAGCTTCTCCAAGTGCTGCCCACTCTGAAGGCCTTAAGGAAGCAACA
AAACTGAAGCCTTTGAAGAAAGTGCCCCCTAATAAAGCTGATGGAAGTGCGGAATTATCT
TCTAGTCCTACTGGTGCATCAGATGCCAAAACTCGCAAAGTAGGTAGTCTTCCAACCTAC
GATATCAATTTCAAGTGTGATGAAAGAGCTGAGAAAAGGAAAGAGTTTTACTCCAAGCTT
GAAGAAAAAATTCACGCAAAGGAAGTTGAGAAGAGTAATCTGCAAGCCAAGACTAAGGAA
ACTCAGGAAGCTGAGATCAAAATGTTAAGGAAGAGCTTAAAATTTAAAGCAACTCCCATG
CCAAGCTTTTATCAAGAACCTGCTCCTCCAAAGGTGGAATTAAAGAAGATTCCACCAACA
AGAGCTAAATCCCCCAAACTTGGGAGGAGAAAGAGCTCTCCCACCAAAGAAGGAAACAAC
GAGAGTGTCATGCGCCCAAGTAGGTTAAGCTTGGACGAAAATGCATCTCAAAATGATCCC
GTCAAAGGGCATTCTCCGCTCAATTTTAAGAAGCCTCAAAGGAAGTCACTTCCAAAGCTG
CCATCTGAGAAAACCAACTTATTCAATGAAACAAGAAAGCCTTCTATTCGCAAATCTAGC
TTATCCAAGAAATCAACTGAAGCTGCATCTCTGCCGAATGCTTTACCCAAAGAGATGAGT
GAAGTTGCTTCTCAACCAGACAACCAACTCGAGCAAACTACTGAACGCGAAACAGATGTT
CAAGAGTGTGAGGTTGTATCAACTGTTGAATCAAGCCAGCCAGAGACTGTAGTTGAAGCT
CAAATAGAGACTGATCTGGTGGAGGAACACGTTACAGTCGAGCACTAA

Peptide Sequence

PEP ID

XP_016494401.1
PEP Infomation

PREDICTED: protein WVD2-like 5 isoform X2 [Nicotiana tabacum]
Sequence

MMDVVNNIAVSGNGLGFGNGVHQLPEVVAGIPNGMPHASSSTEELERSFQSTAVLNDSET
VDSSVQEVSREAMTTAESNAGVSSEEHEAKESDEAKNSKERKAPGRARNTKNSSPKNGAA
KKSKDGKDASNGTLASKSRPKQPSSTDAKSKSFSDKKTTEYYSKPTLAHLNVNRAKQPGH
AEVASASPSAAHSEGLKEATKLKPLKKVPPNKADGSAELSSSPTGASDAKTRKVGSLPTY
DINFKCDERAEKRKEFYSKLEEKIHAKEVEKSNLQAKTKETQEAEIKMLRKSLKFKATPM
PSFYQEPAPPKVELKKIPPTRAKSPKLGRRKSSPTKEGNNESVMRPSRLSLDENASQNDP
VKGHSPLNFKKPQRKSLPKLPSEKTNLFNETRKPSIRKSSLSKKSTEAASLPNALPKEMS
EVASQPDNQLEQTTERETDVQECEVVSTVESSQPETVVEAQIETDLVEEHVTVEH

Transcript Sequence

Gene sequence data has not been registered.